Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comec | DI534_12625 | Not Available | Positive | 2672336 - 2674765 | 81514.0 |
| dna polymerase iii subunit delta | DI534_12630 | Not Available | Positive | 2674820 - 2675842 | 35951.1 |
| 30s ribosomal protein s20 | DI534_12635 | Not Available | Negative | 2675934 - 2676194 | 9168.17 |
| hypothetical protein | DI534_12640 | Not Available | Positive | 2676197 - 2676826 | 21113.3 |
| elongation factor 4 | DI534_12645 | Not Available | Positive | 2676943 - 2678808 | 68202.5 |
| hypothetical protein | DI534_12650 | Not Available | Positive | 2678844 - 2679059 | 7712.21 |
| hypothetical protein | DI534_12655 | Not Available | Positive | 2679063 - 2679392 | 12113.6 |
| hypothetical protein | DI534_12660 | Not Available | Positive | 2679405 - 2679755 | 12539.8 |
| hypothetical protein | DI534_12665 | Not Available | Positive | 2679728 - 2680462 | 27090.1 |
| duf1990 domain-containing protein | DI534_12670 | Not Available | Positive | 2680590 - 2681228 | 23092.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
