Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI534_12575 | Not Available | Positive | 2662001 - 2662906 | 32416.9 |
| abc transporter permease | DI534_12580 | Not Available | Positive | 2662906 - 2663613 | 24619.9 |
| glycine/betaine abc transporter permease | DI534_12585 | Not Available | Positive | 2663610 - 2664350 | 25300.6 |
| glycine/betaine abc transporter | DI534_12590 | Not Available | Positive | 2664347 - 2665276 | 31426.3 |
| deda family protein | DI534_12595 | Not Available | Negative | 2665382 - 2665981 | 21591.3 |
| hypothetical protein | DI534_12600 | Not Available | Negative | 2666068 - 2666904 | 30365.3 |
| aminodeoxychorismate synthase component i | DI534_12605 | Not Available | Positive | 2666916 - 2668244 | 46592.8 |
| hypothetical protein | DI534_12610 | Not Available | Positive | 2668298 - 2668837 | 19737.6 |
| leucine--trna ligase | DI534_12615 | Not Available | Positive | 2668971 - 2671535 | 94532.8 |
| competence protein comea | DI534_12620 | Not Available | Positive | 2671824 - 2672441 | 20815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
