Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_12525 | Not Available | Positive | 2651269 - 2651532 | 9612.97 |
| hypothetical protein | DI534_12530 | Not Available | Negative | 2651613 - 2652233 | 21962.4 |
| 2-nitropropane dioxygenase | DI534_12535 | Not Available | Positive | 2652573 - 2653625 | 35929.8 |
| serine/threonine protein kinase | DI534_12540 | Not Available | Positive | 2653641 - 2655119 | 53226.6 |
| llm class flavin-dependent oxidoreductase | DI534_12545 | Not Available | Positive | 2655171 - 2656226 | 38072.0 |
| mfs transporter | DI534_12550 | Not Available | Positive | 2656851 - 2658353 | 51336.0 |
| glycosyl hydrolase family 3 | DI534_12555 | Not Available | Positive | 2658437 - 2659624 | 40223.9 |
| hypothetical protein | DI534_12560 | Not Available | Negative | 2659661 - 2659951 | 9282.75 |
| acp synthase | DI534_12565 | Not Available | Negative | 2660087 - 2661142 | 39024.6 |
| tetr/acrr family transcriptional regulator | DI534_12570 | Not Available | Positive | 2661284 - 2661874 | 20949.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
