Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_12475 | Not Available | Negative | 2635341 - 2635922 | 21292.2 |
| hypothetical protein | DI534_12480 | Not Available | Negative | 2636128 - 2636388 | 9399.06 |
| aaa family atpase | DI534_12485 | Not Available | Negative | 2636439 - 2638199 | 66101.2 |
| nucleotide pyrophosphohydrolase | DI534_12490 | Not Available | Negative | 2638186 - 2638497 | 11731.8 |
| hypothetical protein | DI534_12495 | Not Available | Positive | 2638743 - 2640746 | 72838.5 |
| dead/deah box helicase | DI534_12500 | Not Available | Negative | 2640998 - 2645689 | 168979.0 |
| hypothetical protein | DI534_12505 | Not Available | Negative | 2645686 - 2648967 | 118308.0 |
| hypothetical protein | DI534_12510 | Not Available | Negative | 2648981 - 2649358 | 13353.6 |
| dna mismatch repair protein mutt | DI534_12515 | Not Available | Positive | 2649517 - 2649912 | 14205.0 |
| hypothetical protein | DI534_12520 | Not Available | Negative | 2649896 - 2650996 | 40805.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
