Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase mazf9 | DI534_12425 | Not Available | Negative | 2627411 - 2627755 | 11907.4 |
| antitoxin | DI534_12430 | Not Available | Negative | 2627788 - 2627997 | 7454.49 |
| hypothetical protein | DI534_12435 | Not Available | Positive | 2628206 - 2628736 | 17424.2 |
| fluoride efflux transporter crcb | DI534_12440 | Not Available | Positive | 2628733 - 2629110 | 12852.9 |
| histidine phosphatase family protein | DI534_12445 | Not Available | Positive | 2629089 - 2629667 | 20088.8 |
| abc transporter permease | DI534_12450 | Not Available | Negative | 2629685 - 2630479 | 27628.0 |
| abc transporter | DI534_12455 | Not Available | Negative | 2630476 - 2631441 | 33891.9 |
| tetr/acrr family transcriptional regulator | DI534_12460 | Not Available | Negative | 2631438 - 2632139 | 25102.8 |
| calcium-binding protein | DI534_12465 | Not Available | Positive | 2632711 - 2633958 | 42417.4 |
| dna polymerase iii subunit epsilon | DI534_12470 | Not Available | Positive | 2634046 - 2635284 | 44031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
