Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DI534_12370 | Not Available | Negative | 2617274 - 2617960 | 25405.0 |
| duf4386 domain-containing protein | DI534_12375 | Not Available | Positive | 2618044 - 2618751 | 24048.0 |
| hypothetical protein | DI534_12380 | Not Available | Positive | 2618760 - 2619038 | 10191.9 |
| hypothetical protein | DI534_12385 | Not Available | Negative | 2619105 - 2619950 | 30675.4 |
| hypothetical protein | DI534_12395 | Not Available | Negative | 2621054 - 2621920 | 30244.2 |
| transcriptional regulator | DI534_12400 | Not Available | Negative | 2621917 - 2622954 | 36834.1 |
| sugar abc transporter substrate-binding protein | DI534_12405 | Not Available | Positive | 2623141 - 2624499 | 47755.4 |
| sugar abc transporter permease | DI534_12410 | Not Available | Positive | 2624499 - 2625410 | 32709.7 |
| sugar abc transporter permease | DI534_12415 | Not Available | Positive | 2625407 - 2626231 | 29903.5 |
| carboxylesterase | DI534_12420 | Not Available | Positive | 2626228 - 2627406 | 40999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
