Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | DI534_12320 | Not Available | Positive | 2608732 - 2608986 | 8810.6 |
| gtpase obge | DI534_12325 | Not Available | Positive | 2609075 - 2610601 | 53572.3 |
| glutamate 5-kinase | DI534_12330 | Not Available | Positive | 2610598 - 2611383 | 26595.9 |
| glutamate-5-semialdehyde dehydrogenase | DI534_12335 | Not Available | Positive | 2611618 - 2612877 | 43957.6 |
| hypothetical protein | DI534_12340 | Not Available | Positive | 2612906 - 2613115 | 7200.49 |
| nicotinic acid mononucleotide adenylyltransferase | DI534_12345 | Not Available | Positive | 2613125 - 2613727 | 22106.3 |
| hypothetical protein | DI534_12350 | Not Available | Positive | 2613724 - 2615550 | 61692.4 |
| ribosome silencing factor | DI534_12355 | Not Available | Positive | 2615580 - 2615957 | 13711.3 |
| antibiotic biosynthesis monooxygenase | DI534_12360 | Not Available | Negative | 2615917 - 2616495 | 21242.6 |
| Trna-ala | Not Available | Not Available | Positive | 2616719 - 2616794 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
