Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-heme iron oxygenase ferredoxin subunit | DI534_01150 | Not Available | Positive | 248960 - 249286 | 11364.5 |
| fe-s cluster assembly atpase sufc | DI534_01155 | Not Available | Positive | 249298 - 250056 | 27656.0 |
| hypothetical protein | DI534_01160 | Not Available | Positive | 250084 - 250413 | 12219.5 |
| tetr family transcriptional regulator | DI534_01165 | Not Available | Negative | 250425 - 251045 | 21833.9 |
| bioy family transporter | DI534_01170 | Not Available | Positive | 251114 - 251734 | 21254.8 |
| abc transporter atp-binding protein | DI534_01175 | Not Available | Positive | 251731 - 252438 | 25113.2 |
| hypothetical protein | DI534_01180 | Not Available | Positive | 252435 - 253028 | 21142.8 |
| abc transporter | DI534_01185 | Not Available | Positive | 253236 - 254834 | 57461.7 |
| surf1 family protein | DI534_01190 | Not Available | Negative | 254872 - 255717 | 30822.4 |
| hypothetical protein | DI534_01195 | Not Available | Negative | 255714 - 255947 | 8496.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
