Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol reductant abc exporter subunit cydc | DI534_12120 | Not Available | Positive | 2564029 - 2567376 | 113365.0 |
| hypothetical protein | DI534_12125 | Not Available | Positive | 2567744 - 2569078 | 47868.7 |
| dna-binding response regulator | DI534_12130 | Not Available | Positive | 2569137 - 2569859 | 25946.2 |
| hypothetical protein | DI534_12135 | Not Available | Negative | 2570027 - 2570194 | 6301.28 |
| cold-shock protein | DI534_12140 | Not Available | Negative | 2570646 - 2570849 | 7054.11 |
| acyl-coa desaturase | DI534_12145 | Not Available | Negative | 2570901 - 2571983 | 40174.0 |
| hypothetical protein | DI534_12150 | Not Available | Negative | 2572080 - 2574467 | 87953.1 |
| Trna-gly | Not Available | Not Available | Positive | 2574501 - 2574571 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2574876 - 2574950 | Not Available |
| trigger factor | DI534_12165 | Not Available | Positive | 2574987 - 2576360 | 49577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
