Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DI534_12070 | Not Available | Positive | 2551755 - 2552378 | 23433.6 |
| amidohydrolase | DI534_12075 | Not Available | Positive | 2552375 - 2553844 | 50887.4 |
| dna starvation/stationary phase protection protein | DI534_12080 | Not Available | Negative | 2554113 - 2554604 | 17340.5 |
| dna-binding response regulator | DI534_12085 | Not Available | Negative | 2554707 - 2555327 | 22499.3 |
| hypothetical protein | DI534_12090 | Not Available | Negative | 2555324 - 2556961 | 57787.6 |
| hypothetical protein | DI534_12095 | Not Available | Positive | 2556719 - 2557900 | 41000.6 |
| acetate kinase | DI534_12100 | Not Available | Negative | 2557984 - 2559108 | 39310.1 |
| phosphate acetyltransferase | DI534_12105 | Not Available | Negative | 2559108 - 2561195 | 72771.3 |
| cytochrome ubiquinol oxidase subunit i | DI534_12110 | Not Available | Positive | 2561358 - 2562971 | 58392.3 |
| cytochrome d ubiquinol oxidase subunit ii | DI534_12115 | Not Available | Positive | 2563002 - 2564051 | 37629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
