Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | DI534_12015 | Not Available | Positive | 2542638 - 2542946 | 10556.5 |
| sulfurtransferase | DI534_12020 | Not Available | Positive | 2542946 - 2543272 | 11512.9 |
| transcriptional regulator | DI534_12025 | Not Available | Positive | 2543269 - 2543559 | 9944.83 |
| hypothetical protein | DI534_12030 | Not Available | Negative | 2543571 - 2543981 | 14017.8 |
| atp-binding protein | DI534_12035 | Not Available | Negative | 2543978 - 2544532 | 20042.0 |
| aminopeptidase n | DI534_12045 | Not Available | Negative | 2545521 - 2548079 | 93814.1 |
| septum formation initiator | DI534_12050 | Not Available | Positive | 2548245 - 2549492 | 39885.8 |
| hypothetical protein | DI534_12055 | Not Available | Negative | 2549450 - 2550181 | 26201.9 |
| ribose-5-phosphate isomerase | DI534_12060 | Not Available | Positive | 2550273 - 2550758 | 17625.5 |
| dna glycosylase | DI534_12065 | Not Available | Positive | 2550761 - 2551744 | 35861.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
