Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | DI534_11965 | Not Available | Positive | 2532511 - 2534190 | 61885.9 |
| 4-hydroxybenzoyl-coa thioesterase | DI534_11970 | Not Available | Positive | 2534198 - 2534671 | 17508.1 |
| acyl-coa thioesterase ii | DI534_11975 | Not Available | Negative | 2534698 - 2535591 | 32767.6 |
| hypothetical protein | DI534_11980 | Not Available | Positive | 2535643 - 2536335 | 24527.4 |
| hypothetical protein | DI534_11985 | Not Available | Negative | 2536337 - 2536999 | 23417.0 |
| hypothetical protein | DI534_11990 | Not Available | Negative | 2536992 - 2537687 | 25114.2 |
| fad-binding dehydrogenase | DI534_11995 | Not Available | Negative | 2537776 - 2539428 | 60068.4 |
| globin | DI534_12000 | Not Available | Negative | 2539483 - 2539881 | 15255.1 |
| mechanosensitive ion channel protein mscs | DI534_12005 | Not Available | Negative | 2539896 - 2540885 | 35084.3 |
| coa-disulfide reductase | DI534_12010 | Not Available | Positive | 2540965 - 2542641 | 58274.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
