Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11810 | Not Available | Positive | 2513409 - 2514038 | 21606.5 |
| abc transporter atp-binding protein | DI534_11815 | Not Available | Positive | 2514054 - 2515535 | 51477.8 |
| abc transporter | DI534_11820 | Not Available | Positive | 2515532 - 2516311 | 26877.1 |
| atp-binding protein | DI534_11825 | Not Available | Positive | 2516347 - 2516877 | 18857.2 |
| hypothetical protein | DI534_11830 | Not Available | Negative | 2516832 - 2517185 | 13417.7 |
| duf2017 domain-containing protein | DI534_11835 | Not Available | Negative | 2517182 - 2517634 | 16900.9 |
| atp-dependent clp protease adapter clps | DI534_11840 | Not Available | Negative | 2517645 - 2517911 | 10349.3 |
| Trna-his | Not Available | Not Available | Positive | 2517938 - 2518010 | Not Available |
| oligoribonuclease | DI534_11850 | Not Available | Negative | 2518039 - 2518662 | 23100.4 |
| Trna-arg | Not Available | Not Available | Positive | 2518741 - 2518813 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
