Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | DI534_11760 | Not Available | Positive | 2502418 - 2505690 | 118077.0 |
| macrolide 2'-phosphotransferase | DI534_11765 | Not Available | Negative | 2505713 - 2506705 | 34849.5 |
| nad(+) diphosphatase | DI534_11770 | Not Available | Positive | 2506793 - 2507767 | 34165.5 |
| atp-dependent dna helicase | DI534_11775 | Not Available | Positive | 2507734 - 2509467 | 62791.8 |
| hypothetical protein | DI534_11780 | Not Available | Negative | 2509334 - 2510185 | 30253.7 |
| nad(p)-dependent dehydrogenase | DI534_11785 | Not Available | Negative | 2510262 - 2511158 | 31600.2 |
| preprotein translocase yidc | DI534_11790 | Not Available | Negative | 2511228 - 2511950 | 25087.2 |
| hypothetical protein | DI534_11795 | Not Available | Negative | 2512024 - 2512311 | 9893.53 |
| hypothetical protein | DI534_11800 | Not Available | Negative | 2512382 - 2512642 | 9073.25 |
| duf2781 domain-containing protein | DI534_11805 | Not Available | Negative | 2512686 - 2513192 | 19157.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
