Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11710 | Not Available | Positive | 2491555 - 2492046 | 17531.3 |
| xaa-pro aminopeptidase | DI534_11715 | Not Available | Negative | 2492071 - 2493522 | 52010.8 |
| endonuclease/exonuclease/phosphatase family protein | DI534_11720 | Not Available | Negative | 2493626 - 2494645 | 34887.5 |
| phosphatase | DI534_11725 | Not Available | Positive | 2494771 - 2495670 | 30868.2 |
| hypothetical protein | DI534_11730 | Not Available | Negative | 2495658 - 2496269 | 21197.5 |
| rna helicase | DI534_11735 | Not Available | Negative | 2496333 - 2497769 | 51003.7 |
| hypothetical protein | DI534_11740 | Not Available | Positive | 2497871 - 2498584 | 26457.9 |
| hypothetical protein | DI534_11745 | Not Available | Negative | 2498596 - 2498892 | 10311.8 |
| duf3107 domain-containing protein | DI534_11750 | Not Available | Negative | 2498918 - 2499142 | 7719.18 |
| atp-dependent dna helicase | DI534_11755 | Not Available | Positive | 2499159 - 2502425 | 115285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
