Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11660 | Not Available | Positive | 2481300 - 2482538 | 45508.7 |
| duf3117 domain-containing protein | DI534_11665 | Not Available | Positive | 2482661 - 2482831 | 5841.15 |
| methyltransferase | DI534_11670 | Not Available | Negative | 2482943 - 2483575 | 21946.0 |
| sec-independent protein translocase tatb | DI534_11675 | Not Available | Positive | 2483634 - 2484014 | 13931.8 |
| succinic semialdehyde dehydrogenase | DI534_11680 | Not Available | Negative | 2484037 - 2485587 | 54344.3 |
| mfs transporter | DI534_11685 | Not Available | Positive | 2485802 - 2487205 | 48179.2 |
| aspartate aminotransferase family protein | DI534_11690 | Not Available | Positive | 2487202 - 2488656 | 50275.1 |
| sodium:proton antiporter | DI534_11695 | Not Available | Negative | 2488668 - 2489726 | 35896.8 |
| duf1003 domain-containing protein | DI534_11700 | Not Available | Negative | 2489723 - 2490223 | 19314.1 |
| magnesium transporter | DI534_11705 | Not Available | Negative | 2490210 - 2491517 | 47126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
