Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11560 | Not Available | Negative | 2459298 - 2459870 | 21291.8 |
| dipeptide/oligopeptide/nickel abc transporter atp-binding protein | DI534_11565 | Not Available | Negative | 2459867 - 2460817 | 34983.4 |
| peptide abc transporter atp-binding protein | DI534_11570 | Not Available | Negative | 2460850 - 2461875 | 37083.7 |
| abc transporter permease | DI534_11575 | Not Available | Negative | 2461884 - 2462918 | 37936.2 |
| hypothetical protein | DI534_11580 | Not Available | Negative | 2462998 - 2464743 | 61351.8 |
| peptide abc transporter permease | DI534_11585 | Not Available | Negative | 2464836 - 2465816 | 34675.1 |
| hypothetical protein | DI534_11590 | Not Available | Positive | 2465933 - 2467909 | 68307.9 |
| translational gtpase typa | DI534_11595 | Not Available | Positive | 2467976 - 2469889 | 69641.0 |
| hypothetical protein | DI534_11600 | Not Available | Positive | 2469906 - 2470334 | 14264.0 |
| gdsl family lipase | DI534_11605 | Not Available | Positive | 2470432 - 2471220 | 27926.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
