Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | DI534_11460 | Not Available | Negative | 2436048 - 2437130 | 38646.4 |
| hypothetical protein | DI534_11465 | Not Available | Positive | 2437468 - 2437950 | 16588.8 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | DI534_11470 | Not Available | Negative | 2437956 - 2438534 | 21700.3 |
| glutaminase | DI534_11475 | Not Available | Positive | 2438655 - 2439683 | 35772.0 |
| mfs transporter | DI534_11480 | Not Available | Positive | 2439734 - 2441317 | 55675.2 |
| hypothetical protein | DI534_11485 | Not Available | Positive | 2441361 - 2441699 | 12592.9 |
| atp-dependent dna ligase | DI534_11490 | Not Available | Negative | 2441745 - 2442104 | 13253.7 |
| iclr family transcriptional regulator | DI534_11495 | Not Available | Negative | 2442171 - 2442938 | 27527.3 |
| histidine ammonia-lyase | DI534_11500 | Not Available | Positive | 2443043 - 2444560 | 52426.1 |
| urocanate hydratase | DI534_11505 | Not Available | Positive | 2444557 - 2446236 | 59629.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
