Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11410 | Not Available | Negative | 2428348 - 2428667 | 11495.7 |
| 3-ketoacyl-acp reductase | DI534_11415 | Not Available | Positive | 2428795 - 2429598 | 28246.4 |
| redox-regulated atpase ychf | DI534_11420 | Not Available | Positive | 2429679 - 2430752 | 37771.2 |
| hypothetical protein | DI534_11425 | Not Available | Positive | 2430781 - 2431125 | 12396.5 |
| hypothetical protein | DI534_11430 | Not Available | Negative | 2431154 - 2431678 | 18052.4 |
| eama/rhat family transporter | DI534_11435 | Not Available | Negative | 2431848 - 2432693 | 27730.0 |
| abc transporter atp-binding protein | DI534_11440 | Not Available | Negative | 2432690 - 2433529 | 29221.8 |
| abc transporter atp-binding protein | DI534_11445 | Not Available | Negative | 2433526 - 2434371 | 30035.2 |
| energy-coupling factor transporter transmembrane protein ecft | DI534_11450 | Not Available | Negative | 2434368 - 2435162 | 28175.8 |
| histidine kinase | DI534_11455 | Not Available | Negative | 2435169 - 2436008 | 28636.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
