Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | DI534_11300 | Not Available | Positive | 2404958 - 2406661 | 62551.2 |
| xre family transcriptional regulator | DI534_11305 | Not Available | Positive | 2407045 - 2407665 | 22881.5 |
| hypothetical protein | DI534_11310 | Not Available | Negative | 2407672 - 2408064 | 13879.5 |
| fad-dependent oxidoreductase | DI534_11315 | Not Available | Negative | 2408077 - 2409420 | 48870.9 |
| type iii glutamate--ammonia ligase | DI534_11320 | Not Available | Positive | 2409557 - 2410954 | 50927.7 |
| glutamine amidotransferase | DI534_11325 | Not Available | Positive | 2410982 - 2411881 | 32180.8 |
| protein glxc | DI534_11330 | Not Available | Positive | 2411878 - 2412567 | 24165.9 |
| fmn-binding glutamate synthase family protein | DI534_11335 | Not Available | Positive | 2412567 - 2413901 | 47234.7 |
| amino acid permease | DI534_11340 | Not Available | Positive | 2414112 - 2415734 | 57476.4 |
| siderophore-iron reductase fhuf | DI534_11345 | Not Available | Positive | 2415934 - 2416416 | 16727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
