Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_11245 | Not Available | Negative | 2394565 - 2394882 | 11162.5 |
| hypothetical protein | DI534_11250 | Not Available | Positive | 2395208 - 2395567 | 12965.5 |
| hypothetical protein | DI534_11255 | Not Available | Positive | 2395610 - 2396308 | 24691.8 |
| hypothetical protein | DI534_11260 | Not Available | Negative | 2396857 - 2397513 | 24819.3 |
| transporter | DI534_11270 | Not Available | Positive | 2398089 - 2398526 | 15147.8 |
| arac family transcriptional regulator | DI534_11275 | Not Available | Negative | 2398621 - 2399421 | 28865.4 |
| tonb-dependent siderophore receptor | DI534_11280 | Not Available | Positive | 2399601 - 2401865 | 81288.5 |
| abc transporter substrate-binding protein | DI534_11285 | Not Available | Positive | 2401880 - 2403094 | 43580.1 |
| iron abc transporter permease | DI534_11290 | Not Available | Positive | 2403133 - 2404161 | 36140.2 |
| iron abc transporter | DI534_11295 | Not Available | Positive | 2404158 - 2404964 | 28667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
