Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| res domain-containing protein | DI534_11195 | Not Available | Negative | 2381078 - 2381752 | 23901.6 |
| hypothetical protein | DI534_11200 | Not Available | Negative | 2381745 - 2382422 | 24173.0 |
| hypothetical protein | DI534_11205 | Not Available | Positive | 2382516 - 2383388 | 33270.6 |
| hypothetical protein | DI534_11210 | Not Available | Positive | 2383569 - 2384621 | 38341.8 |
| exonuclease iii | DI534_11215 | Not Available | Positive | 2384636 - 2385919 | 45651.1 |
| hypothetical protein | DI534_11220 | Not Available | Positive | 2386010 - 2387707 | 63081.3 |
| hypothetical protein | DI534_11225 | Not Available | Positive | 2387718 - 2389640 | 70147.4 |
| hypothetical protein | DI534_11230 | Not Available | Positive | 2389642 - 2390106 | 16099.1 |
| hypothetical protein | DI534_11235 | Not Available | Negative | 2390335 - 2392002 | 61509.5 |
| hypothetical protein | DI534_11240 | Not Available | Positive | 2392274 - 2392903 | 23325.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
