Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | DI534_11145 | Not Available | Positive | 2368753 - 2369721 | 34527.6 |
| ferrichrome abc transporter substrate-binding protein | DI534_11150 | Not Available | Positive | 2369841 - 2370812 | 34829.7 |
| mate family efflux transporter | DI534_11155 | Not Available | Positive | 2370875 - 2372164 | 43052.9 |
| ferrichrome abc transporter permease | DI534_11160 | Not Available | Positive | 2372161 - 2373162 | 33223.5 |
| ferrichrome abc transporter permease | DI534_11165 | Not Available | Positive | 2373159 - 2374199 | 35035.8 |
| ferrichrome abc transporter atp-binding protein | DI534_11170 | Not Available | Positive | 2374196 - 2374975 | 27395.0 |
| tonb-dependent siderophore receptor | DI534_11175 | Not Available | Positive | 2375178 - 2377517 | 82927.2 |
| mfs transporter | DI534_11180 | Not Available | Negative | 2377585 - 2378760 | 39218.9 |
| hypothetical protein | DI534_11185 | Not Available | Positive | 2379288 - 2380073 | 27603.9 |
| acid phosphatase | DI534_11190 | Not Available | Positive | 2380073 - 2380810 | 25900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
