Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transporter | DI534_01050 | Not Available | Positive | 224445 - 224810 | 13250.2 |
| 6-phosphogluconolactonase | DI534_01055 | Not Available | Negative | 224853 - 225653 | 28591.7 |
| opca protein | DI534_01060 | Not Available | Negative | 225656 - 226615 | 33937.1 |
| glucose-6-phosphate dehydrogenase | DI534_01065 | Not Available | Negative | 226629 - 228170 | 57375.3 |
| glucose-6-phosphate isomerase | DI534_01070 | Not Available | Negative | 228174 - 229772 | 55397.8 |
| transaldolase | DI534_01075 | Not Available | Negative | 229769 - 230881 | 39227.3 |
| transketolase | DI534_01080 | Not Available | Negative | 230914 - 233016 | 74788.9 |
| bifunctional d-altronate/d-mannonate dehydratase | DI534_01085 | Not Available | Negative | 233383 - 234621 | 45586.3 |
| gluconate 5-dehydrogenase | DI534_01090 | Not Available | Negative | 234689 - 235444 | 26369.5 |
| hypothetical protein | DI534_01095 | Not Available | Negative | 235468 - 236904 | 51631.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
