Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdopterin binding subunit | DI534_10995 | Not Available | Positive | 2337519 - 2339867 | 84754.9 |
| hypothetical protein | DI534_11000 | Not Available | Negative | 2339935 - 2340861 | 32901.9 |
| hypothetical protein | DI534_11005 | Not Available | Negative | 2340872 - 2343451 | 93293.8 |
| atpase | DI534_11010 | Not Available | Negative | 2343354 - 2344445 | 40414.6 |
| hypothetical protein | DI534_11015 | Not Available | Positive | 2344598 - 2344933 | 12614.3 |
| xanthine dehydrogenase accessory protein xdhc | DI534_11020 | Not Available | Negative | 2345026 - 2345859 | 29239.0 |
| hypothetical protein | DI534_11025 | Not Available | Negative | 2345929 - 2346228 | 10766.8 |
| oxidoreductase | DI534_11030 | Not Available | Negative | 2346225 - 2347175 | 34157.8 |
| hypothetical protein | DI534_11035 | Not Available | Negative | 2347332 - 2347961 | 22536.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | DI534_11040 | Not Available | Negative | 2348123 - 2349178 | 40053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
