Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine dehydratase | DI534_10945 | Not Available | Negative | 2326259 - 2327203 | 33718.5 |
| serine--glyoxylate aminotransferase | DI534_10950 | Not Available | Negative | 2327215 - 2328405 | 41953.4 |
| ureidoglycolate hydrolase | DI534_10955 | Not Available | Negative | 2328491 - 2328988 | 18027.4 |
| (s)-ureidoglycine aminohydrolase | DI534_10960 | Not Available | Negative | 2328992 - 2329822 | 30451.0 |
| cysteine desulfurase | DI534_10965 | Not Available | Negative | 2329879 - 2331111 | 44610.4 |
| lysr family transcriptional regulator | DI534_10970 | Not Available | Positive | 2331265 - 2332200 | 34294.9 |
| polysaccharide deacetylase | DI534_10975 | Not Available | Negative | 2332216 - 2333640 | 53151.8 |
| hydroxyisourate hydrolase | DI534_10980 | Not Available | Positive | 2333989 - 2334357 | 13435.8 |
| mfs transporter | DI534_10985 | Not Available | Positive | 2334431 - 2335618 | 41348.4 |
| xanthine dehydrogenase small subunit | DI534_10990 | Not Available | Positive | 2335966 - 2337507 | 55652.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
