Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DI534_10840 | Not Available | Negative | 2297782 - 2298528 | 26120.4 |
| hypothetical protein | DI534_10850 | Not Available | Negative | 2299621 - 2300823 | 40988.5 |
| hypothetical protein | DI534_10855 | Not Available | Negative | 2300830 - 2301543 | 25192.0 |
| hypothetical protein | DI534_10860 | Not Available | Negative | 2301617 - 2302561 | 34497.8 |
| lysine transporter lyse | DI534_10865 | Not Available | Negative | 2302558 - 2303130 | 19903.1 |
| hypothetical protein | DI534_10870 | Not Available | Negative | 2303224 - 2304183 | 36220.9 |
| gntr family transcriptional regulator | DI534_10875 | Not Available | Negative | 2304786 - 2305637 | 32100.3 |
| gamma-glutamyltransferase | DI534_10880 | Not Available | Positive | 2305829 - 2307604 | 63815.7 |
| hypothetical protein | DI534_10885 | Not Available | Positive | 2307665 - 2308684 | 36941.4 |
| hypothetical protein | DI534_10890 | Not Available | Positive | 2308864 - 2309940 | 37890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
