Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10730 | Not Available | Positive | 2269592 - 2270266 | 24217.2 |
| tonb-dependent receptor | DI534_10735 | Not Available | Positive | 2270752 - 2272821 | 74532.9 |
| cobalamin abc transporter substrate-binding protein | DI534_10740 | Not Available | Positive | 2272836 - 2273726 | 31267.9 |
| abc transporter permease | DI534_10745 | Not Available | Positive | 2273723 - 2274724 | 33048.6 |
| abc transporter | DI534_10750 | Not Available | Positive | 2274721 - 2275515 | 27167.0 |
| hypothetical protein | DI534_10755 | Not Available | Positive | 2275512 - 2276213 | 24797.8 |
| hypothetical protein | DI534_10760 | Not Available | Positive | 2276210 - 2277238 | 36432.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DI534_10765 | Not Available | Positive | 2277292 - 2277873 | 21300.4 |
| hypothetical protein | DI534_10770 | Not Available | Negative | 2277883 - 2279073 | 41559.1 |
| hypothetical protein | DI534_10775 | Not Available | Negative | 2279336 - 2279692 | 12657.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
