Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | DI534_10680 | Not Available | Positive | 2258211 - 2259095 | 30352.1 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DI534_10685 | Not Available | Positive | 2259092 - 2260504 | 49912.3 |
| methylenetetrahydrofolate reductase | DI534_10690 | Not Available | Negative | 2260636 - 2261586 | 33253.0 |
| merr family transcriptional regulator | DI534_10695 | Not Available | Positive | 2261773 - 2262411 | 24253.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DI534_10700 | Not Available | Negative | 2262445 - 2263443 | 34276.4 |
| hypothetical protein | DI534_10705 | Not Available | Negative | 2263500 - 2264459 | 33502.3 |
| oxidoreductase | DI534_10710 | Not Available | Negative | 2264452 - 2265567 | 40308.8 |
| hypothetical protein | DI534_10715 | Not Available | Positive | 2265957 - 2267258 | 44544.2 |
| mtaa/cmua family methyltransferase | DI534_10720 | Not Available | Positive | 2267279 - 2269132 | 67161.0 |
| hypothetical protein | DI534_10725 | Not Available | Positive | 2269161 - 2269457 | 10385.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
