Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | DI534_01000 | Not Available | Positive | 211416 - 213494 | 77628.6 |
| excinuclease abc subunit a | DI534_01005 | Not Available | Positive | 213550 - 216468 | 106768.0 |
| excinuclease abc subunit c | DI534_01010 | Not Available | Positive | 216470 - 218404 | 71711.6 |
| rnase adapter rapz | DI534_01015 | Not Available | Positive | 218401 - 219276 | 31722.0 |
| dna-binding protein whia | DI534_01020 | Not Available | Positive | 219338 - 220312 | 34730.8 |
| superoxide dismutase | DI534_01025 | Not Available | Positive | 220337 - 220963 | 22841.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DI534_01030 | Not Available | Positive | 221054 - 222061 | 36081.7 |
| phosphoglycerate kinase | DI534_01035 | Not Available | Positive | 222066 - 223283 | 41654.9 |
| triose-phosphate isomerase | DI534_01040 | Not Available | Positive | 223271 - 224071 | 28040.4 |
| preprotein translocase subunit secg | DI534_01045 | Not Available | Positive | 224146 - 224409 | 9100.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
