Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,6-dimethylbenzimidazole synthase | DI534_10580 | Not Available | Negative | 2241318 - 2242037 | 27406.0 |
| methyl-accepting chemotaxis sensory transducer | DI534_10585 | Not Available | Positive | 2242424 - 2243710 | 45139.0 |
| hypothetical protein | DI534_10590 | Not Available | Negative | 2243720 - 2244133 | 14890.9 |
| cobyrinic acid a,c-diamide synthase | DI534_10595 | Not Available | Negative | 2244130 - 2245470 | 46558.6 |
| uroporphyrinogen-iii c-methyltransferase | DI534_10600 | Not Available | Negative | 2245467 - 2246246 | 26578.3 |
| precorrin-4 c(11)-methyltransferase | DI534_10605 | Not Available | Negative | 2246267 - 2247034 | 26735.8 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbit | DI534_10610 | Not Available | Negative | 2247036 - 2247644 | 21446.8 |
| precorrin-3b c(17)-methyltransferase | DI534_10615 | Not Available | Negative | 2247641 - 2248423 | 27832.3 |
| precorrin-2 c(20)-methyltransferase | DI534_10620 | Not Available | Negative | 2248420 - 2249193 | 27430.0 |
| precorrin-8x methylmutase | DI534_10625 | Not Available | Negative | 2249190 - 2249822 | 21756.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
