Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin | DI534_10530 | Not Available | Positive | 2230009 - 2230812 | 28810.0 |
| cardiolipin synthase | DI534_10535 | Not Available | Negative | 2230863 - 2232323 | 52669.7 |
| hypothetical protein | DI534_10540 | Not Available | Negative | 2232347 - 2232586 | 8901.87 |
| hypothetical protein | DI534_10545 | Not Available | Positive | 2233272 - 2234162 | 32780.3 |
| lysr family transcriptional regulator | DI534_10550 | Not Available | Negative | 2234382 - 2235269 | 32184.6 |
| amidohydrolase | DI534_10555 | Not Available | Positive | 2235418 - 2236764 | 48248.8 |
| arabinose transporter | DI534_10560 | Not Available | Positive | 2236824 - 2238035 | 40973.8 |
| short-chain dehydrogenase | DI534_10565 | Not Available | Positive | 2238065 - 2238838 | 27946.5 |
| cobalamin-binding protein | DI534_10570 | Not Available | Negative | 2239227 - 2240009 | 28126.0 |
| hypothetical protein | DI534_10575 | Not Available | Negative | 2240126 - 2241088 | 33679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
