Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10480 | Not Available | Negative | 2206931 - 2219581 | 435193.0 |
| hypothetical protein | DI534_10485 | Not Available | Negative | 2219613 - 2220068 | 15975.9 |
| peptidylprolyl isomerase | DI534_10490 | Not Available | Negative | 2220065 - 2221030 | 34039.6 |
| hypothetical protein | DI534_10495 | Not Available | Negative | 2221093 - 2221692 | 22380.1 |
| hypothetical protein | DI534_10500 | Not Available | Negative | 2221696 - 2223564 | 67739.1 |
| energy transducer tonb | DI534_10505 | Not Available | Negative | 2223613 - 2224290 | 23334.9 |
| biopolymer transporter exbd | DI534_10510 | Not Available | Negative | 2224500 - 2224901 | 14596.0 |
| duf2341 domain-containing protein | DI534_10515 | Not Available | Negative | 2224908 - 2226830 | 66528.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | DI534_10520 | Not Available | Negative | 2226830 - 2228629 | 64636.1 |
| peroxidase | DI534_10525 | Not Available | Positive | 2228960 - 2230012 | 38166.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
