Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10425 | Not Available | Positive | 2195374 - 2196804 | 52132.8 |
| dna methyltransferase | DI534_10430 | Not Available | Positive | 2196801 - 2197694 | 33054.2 |
| transcriptional regulator | DI534_10435 | Not Available | Negative | 2197743 - 2198993 | 45180.9 |
| dna processing protein dpra | DI534_10440 | Not Available | Negative | 2199051 - 2200046 | 34082.7 |
| hypothetical protein | DI534_10450 | Not Available | Negative | 2200997 - 2201341 | 12336.1 |
| hypothetical protein | DI534_10455 | Not Available | Negative | 2201809 - 2202357 | 20567.9 |
| hypothetical protein | DI534_10460 | Not Available | Negative | 2202453 - 2203748 | 47188.7 |
| o-succinylhomoserine sulfhydrylase | DI534_10465 | Not Available | Positive | 2204077 - 2204529 | 15928.4 |
| hypothetical protein | DI534_10470 | Not Available | Negative | 2204779 - 2205936 | 40429.2 |
| hypothetical protein | DI534_10475 | Not Available | Negative | 2206328 - 2206762 | 15034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
