Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excisionase | DI534_10365 | Not Available | Negative | 2183632 - 2184258 | 21738.0 |
| dna primase | DI534_10370 | Not Available | Negative | 2184306 - 2185202 | 31735.7 |
| serine/arginine repetitive matrix protein 2 | DI534_10375 | Not Available | Negative | 2185202 - 2186287 | 38744.4 |
| hypothetical protein | DI534_10380 | Not Available | Negative | 2186531 - 2187400 | 32076.8 |
| hypothetical protein | DI534_10385 | Not Available | Negative | 2187620 - 2187871 | 9304.35 |
| mfs transporter | DI534_10390 | Not Available | Negative | 2188093 - 2189616 | 52307.6 |
| tetr family transcriptional regulator | DI534_10395 | Not Available | Negative | 2189690 - 2190256 | 20358.3 |
| hypothetical protein | DI534_10400 | Not Available | Positive | 2190351 - 2190719 | 12571.0 |
| conjugal transfer protein | DI534_10415 | Not Available | Positive | 2191414 - 2194965 | 127408.0 |
| excisionase | DI534_10420 | Not Available | Positive | 2195041 - 2195241 | 7078.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
