Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10315 | Not Available | Negative | 2175126 - 2176592 | 52211.7 |
| hypothetical protein | DI534_10320 | Not Available | Positive | 2176579 - 2176818 | 7172.95 |
| hypothetical protein | DI534_10325 | Not Available | Positive | 2176843 - 2177907 | 36069.6 |
| hypothetical protein | DI534_10330 | Not Available | Negative | 2178145 - 2178414 | 8989.24 |
| hypothetical protein | DI534_10335 | Not Available | Negative | 2178493 - 2178759 | 8856.05 |
| metalloendopeptidase | DI534_10340 | Not Available | Negative | 2178762 - 2180387 | 56515.0 |
| hypothetical protein | DI534_10345 | Not Available | Negative | 2180397 - 2181095 | 24597.8 |
| hypothetical protein | DI534_10350 | Not Available | Negative | 2181175 - 2182254 | 39045.1 |
| hypothetical protein | DI534_10355 | Not Available | Negative | 2182251 - 2183114 | 31644.1 |
| hypothetical protein | DI534_10360 | Not Available | Negative | 2183195 - 2183635 | 16039.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
