Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10255 | Not Available | Negative | 2164890 - 2165396 | 17883.3 |
| hypothetical protein | DI534_10260 | Not Available | Negative | 2165393 - 2166424 | 38736.0 |
| Trna-arg | Not Available | Not Available | Positive | 2166727 - 2166802 | Not Available |
| recombinase family protein | DI534_10270 | Not Available | Negative | 2166765 - 2168462 | 63355.0 |
| hypothetical protein | DI534_10275 | Not Available | Negative | 2168645 - 2168863 | 8274.82 |
| hypothetical protein | DI534_10280 | Not Available | Negative | 2168863 - 2169444 | 22189.3 |
| single-stranded dna-binding protein | DI534_10285 | Not Available | Negative | 2169460 - 2169915 | 17110.8 |
| type vi secretion protein | DI534_10290 | Not Available | Negative | 2169974 - 2171770 | 62384.9 |
| hypothetical protein | DI534_10295 | Not Available | Negative | 2171767 - 2172294 | 18709.3 |
| atp-binding protein | DI534_10300 | Not Available | Negative | 2172324 - 2173883 | 55970.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
