Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diadenosine tetraphosphate hydrolase | DI534_10155 | Not Available | Positive | 2142029 - 2142520 | 18407.7 |
| hypothetical protein | DI534_10160 | Not Available | Negative | 2142631 - 2142837 | 7594.03 |
| hypothetical protein | DI534_10165 | Not Available | Positive | 2142929 - 2143390 | 17637.0 |
| hypothetical protein | DI534_10170 | Not Available | Positive | 2143270 - 2143770 | 18593.0 |
| hypothetical protein | DI534_10175 | Not Available | Positive | 2143767 - 2145140 | 49530.6 |
| hypothetical protein | DI534_10180 | Not Available | Positive | 2145280 - 2146443 | 42600.1 |
| tetr family transcriptional regulator | DI534_10185 | Not Available | Negative | 2146819 - 2147421 | 21333.6 |
| ketopantoate reductase | DI534_10190 | Not Available | Positive | 2147507 - 2148478 | 35252.6 |
| mfs transporter | DI534_10195 | Not Available | Positive | 2148834 - 2150525 | 59134.0 |
| marr family transcriptional regulator | DI534_10200 | Not Available | Positive | 2150522 - 2151016 | 17028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
