Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10100 | Not Available | Positive | 2130602 - 2131420 | 29775.2 |
| phosphoglucomutase, alpha-d-glucose phosphate-specific | DI534_10105 | Not Available | Negative | 2131563 - 2133182 | 57102.7 |
| prephenate dehydratase | DI534_10110 | Not Available | Positive | 2133181 - 2134125 | 33805.3 |
| diacylglycerol kinase | DI534_10115 | Not Available | Negative | 2134254 - 2135249 | 35791.9 |
| serine--trna ligase | DI534_10120 | Not Available | Positive | 2135303 - 2136580 | 46125.8 |
| haloacid dehalogenase | DI534_10125 | Not Available | Positive | 2136577 - 2137404 | 29665.3 |
| Trna-ser | Not Available | Not Available | Positive | 2137443 - 2137527 | Not Available |
| lytr family transcriptional regulator | DI534_10135 | Not Available | Positive | 2137720 - 2138841 | 38776.3 |
| Trna-ser | Not Available | Not Available | Positive | 2138895 - 2138983 | Not Available |
| hypothetical protein | DI534_10145 | Not Available | Negative | 2139334 - 2140395 | 39967.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
