Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | DI534_10050 | Not Available | Positive | 2121314 - 2122087 | 27576.2 |
| gdsl family lipase | DI534_10055 | Not Available | Positive | 2122185 - 2122940 | 27913.3 |
| hypothetical protein | DI534_10060 | Not Available | Positive | 2123046 - 2123327 | 9821.75 |
| hypothetical protein | DI534_10065 | Not Available | Positive | 2123422 - 2124342 | 31158.2 |
| gnat family n-acetyltransferase | DI534_10070 | Not Available | Negative | 2124352 - 2124636 | 10490.6 |
| laci family transcriptional regulator | DI534_10075 | Not Available | Negative | 2124654 - 2125670 | 36204.1 |
| beta-glucosidase | DI534_10080 | Not Available | Negative | 2125704 - 2127125 | 52499.3 |
| sugar abc transporter permease | DI534_10085 | Not Available | Negative | 2127125 - 2127862 | 25990.6 |
| abc transporter permease | DI534_10090 | Not Available | Negative | 2128036 - 2129034 | 37305.1 |
| sugar-binding protein | DI534_10095 | Not Available | Negative | 2129123 - 2130421 | 45651.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
