Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_10000 | Not Available | Positive | 2111424 - 2112353 | 34797.4 |
| transglutaminase | DI534_10005 | Not Available | Positive | 2112350 - 2113195 | 31044.4 |
| mfs transporter | DI534_10010 | Not Available | Positive | 2113208 - 2114566 | 46845.1 |
| hypothetical protein | DI534_10015 | Not Available | Negative | 2114568 - 2115665 | 38277.5 |
| mfs transporter | DI534_10020 | Not Available | Negative | 2115721 - 2117040 | 46749.4 |
| lysophospholipase | DI534_10025 | Not Available | Positive | 2117125 - 2117985 | 30970.0 |
| hypothetical protein | DI534_10030 | Not Available | Negative | 2118038 - 2118586 | 19824.6 |
| arsr family transcriptional regulator | DI534_10035 | Not Available | Negative | 2118508 - 2119224 | 25771.8 |
| lipoate--protein ligase | DI534_10040 | Not Available | Positive | 2119219 - 2120268 | 38054.5 |
| heme abc transporter permease | DI534_10045 | Not Available | Positive | 2120265 - 2121317 | 36137.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
