Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylan esterase | DI534_09950 | Not Available | Negative | 2099911 - 2100639 | 25369.3 |
| aldo/keto reductase | DI534_09955 | Not Available | Positive | 2100541 - 2101536 | 35600.2 |
| pas domain-containing sensor histidine kinase | DI534_09960 | Not Available | Negative | 2101543 - 2103282 | 61973.0 |
| response regulator | DI534_09965 | Not Available | Negative | 2103279 - 2103647 | 13027.6 |
| glucosaminyltransferase | DI534_09970 | Not Available | Negative | 2103790 - 2105283 | 55399.0 |
| histidinol-phosphatase | DI534_09975 | Not Available | Negative | 2105280 - 2105996 | 24624.0 |
| biotin carboxylase | DI534_09980 | Not Available | Negative | 2105993 - 2106979 | 34627.5 |
| hypothetical protein | DI534_09985 | Not Available | Negative | 2106976 - 2108037 | 38498.6 |
| hemin receptor | DI534_09990 | Not Available | Negative | 2108157 - 2109260 | 37816.1 |
| hypothetical protein | DI534_09995 | Not Available | Positive | 2109688 - 2111424 | 63061.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
