Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | DI534_09900 | Not Available | Positive | 2088299 - 2088895 | 21471.4 |
| 1-pyrroline-5-carboxylate dehydrogenase | DI534_09905 | Not Available | Positive | 2088970 - 2092401 | 120947.0 |
| oxidoreductase | DI534_09910 | Not Available | Positive | 2092612 - 2093442 | 29658.1 |
| gntr family transcriptional regulator | DI534_09915 | Not Available | Negative | 2093525 - 2093884 | 12567.1 |
| hypothetical protein | DI534_09920 | Not Available | Negative | 2093881 - 2094753 | 30444.6 |
| asnc family transcriptional regulator | DI534_09925 | Not Available | Negative | 2094823 - 2095260 | 15864.8 |
| n-dimethylarginine dimethylaminohydrolase | DI534_09930 | Not Available | Positive | 2095365 - 2096213 | 31070.5 |
| ornithine--oxo-acid transaminase | DI534_09935 | Not Available | Positive | 2096210 - 2097451 | 43062.5 |
| oxidoreductase | DI534_09940 | Not Available | Positive | 2097531 - 2098553 | 35972.7 |
| acyl-coa dehydrogenase | DI534_09945 | Not Available | Positive | 2098738 - 2099859 | 40532.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
