Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09745 | Not Available | Positive | 2056703 - 2056942 | 8594.18 |
| hypothetical protein | DI534_09750 | Not Available | Negative | 2057249 - 2057473 | 7994.6 |
| hypothetical protein | DI534_09755 | Not Available | Negative | 2057488 - 2058714 | 43826.9 |
| hypothetical protein | DI534_09760 | Not Available | Negative | 2058714 - 2059289 | 21373.3 |
| dna primase | DI534_09770 | Not Available | Negative | 2060815 - 2061597 | 27779.3 |
| dna-binding protein | DI534_09775 | Not Available | Negative | 2061975 - 2062184 | 7726.34 |
| site-specific integrase | DI534_09780 | Not Available | Negative | 2062575 - 2063939 | 50134.0 |
| hypothetical protein | DI534_09785 | Not Available | Negative | 2063927 - 2064172 | 9078.56 |
| Trna-gly | Not Available | Not Available | Positive | 2064290 - 2064360 | Not Available |
| dctp deaminase | DI534_09795 | Not Available | Positive | 2064403 - 2065008 | 22155.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
