Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09695 | Not Available | Negative | 2046380 - 2047324 | 32243.4 |
| helicase | DI534_09700 | Not Available | Positive | 2047384 - 2048676 | 47400.4 |
| biliverdin-producing heme oxygenase | DI534_09705 | Not Available | Negative | 2048880 - 2049527 | 24712.9 |
| hypothetical protein | DI534_09710 | Not Available | Negative | 2049555 - 2049986 | 14005.2 |
| hypothetical protein | DI534_09715 | Not Available | Negative | 2049992 - 2050291 | 11157.0 |
| hypothetical protein | DI534_09720 | Not Available | Positive | 2050343 - 2052064 | 61938.3 |
| cysteine desulfurase-like protein | DI534_09725 | Not Available | Positive | 2052108 - 2053313 | 41798.5 |
| hypothetical protein | DI534_09730 | Not Available | Negative | 2053332 - 2053988 | 23311.7 |
| nad(p)-dependent alcohol dehydrogenase | DI534_09735 | Not Available | Positive | 2054018 - 2054998 | 34265.3 |
| hypothetical protein | DI534_09740 | Not Available | Positive | 2055369 - 2056658 | 48027.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
