Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09645 | Not Available | Negative | 2035667 - 2035939 | 9448.4 |
| restriction endonuclease subunit m | DI534_09650 | Not Available | Positive | 2035981 - 2036646 | 25081.1 |
| restriction endonuclease | DI534_09655 | Not Available | Positive | 2036643 - 2038229 | 58924.5 |
| restriction endonuclease | DI534_09660 | Not Available | Positive | 2038216 - 2040768 | 95833.6 |
| aaa family atpase | DI534_09665 | Not Available | Positive | 2040925 - 2042634 | 62549.7 |
| 50s ribosomal protein l28 | DI534_09670 | Not Available | Positive | 2043010 - 2043246 | 8601.6 |
| 50s ribosomal protein l33 | DI534_09675 | Not Available | Positive | 2043246 - 2043416 | 6729.22 |
| 30s ribosomal protein s14 | DI534_09680 | Not Available | Positive | 2043420 - 2043725 | 11500.0 |
| integration host factor | DI534_09685 | Not Available | Positive | 2043985 - 2044269 | 9571.4 |
| copper transporter | DI534_09690 | Not Available | Positive | 2044373 - 2046340 | 70175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
