Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | DI534_00900 | Not Available | Positive | 186972 - 191579 | 166534.0 |
| glutamate synthase | DI534_00905 | Not Available | Positive | 191582 - 193039 | 52711.7 |
| pyruvate kinase | DI534_00910 | Not Available | Positive | 193092 - 194549 | 52375.1 |
| gtra family protein | DI534_00915 | Not Available | Negative | 194649 - 195110 | 16354.1 |
| dolichol-phosphate mannosyltransferase | DI534_00920 | Not Available | Negative | 195103 - 195837 | 26685.0 |
| hypothetical protein | DI534_00925 | Not Available | Negative | 195856 - 197397 | 54652.3 |
| dna-binding response regulator | DI534_00930 | Not Available | Positive | 197570 - 198244 | 24574.8 |
| sensor histidine kinase | DI534_00935 | Not Available | Positive | 198241 - 199587 | 46935.2 |
| Trna-leu | Not Available | Not Available | Positive | 199637 - 199722 | Not Available |
| response regulator | DI534_00945 | Not Available | Positive | 199787 - 200392 | 22136.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
