Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DI534_09540 | Not Available | Positive | 2017095 - 2017547 | 15871.1 |
| replicative dna helicase | DI534_09545 | Not Available | Positive | 2017973 - 2019352 | 49612.5 |
| alpha/beta hydrolase | DI534_09550 | Not Available | Negative | 2019559 - 2020392 | 29225.3 |
| tetr family transcriptional regulator | DI534_09555 | Not Available | Positive | 2020604 - 2021188 | 21361.1 |
| hypothetical protein | DI534_09560 | Not Available | Positive | 2021278 - 2021874 | 21165.9 |
| tigr01777 family protein | DI534_09565 | Not Available | Positive | 2021980 - 2022873 | 30782.8 |
| hypothetical protein | DI534_09570 | Not Available | Positive | 2022912 - 2023529 | 20684.8 |
| hypothetical protein | DI534_09580 | Not Available | Positive | 2023972 - 2024625 | 23136.9 |
| rna polymerase subunit sigma-24 | DI534_09585 | Not Available | Positive | 2024618 - 2025115 | 18109.7 |
| adenylosuccinate lyase | DI534_09590 | Not Available | Negative | 2025329 - 2026711 | 50081.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
