Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | DI534_09490 | Not Available | Negative | 2006934 - 2007887 | 33602.0 |
| gntr family transcriptional regulator | DI534_09495 | Not Available | Negative | 2007902 - 2009203 | 47395.9 |
| thioredoxin | DI534_09500 | Not Available | Negative | 2009364 - 2009690 | 11721.1 |
| thioredoxin-disulfide reductase | DI534_09505 | Not Available | Negative | 2009715 - 2010671 | 33550.7 |
| murein biosynthesis integral membrane protein murj | DI534_09510 | Not Available | Negative | 2010754 - 2012409 | 56852.4 |
| hypothetical protein | DI534_09515 | Not Available | Negative | 2012402 - 2014132 | 58216.8 |
| cca trna nucleotidyltransferase | DI534_09520 | Not Available | Positive | 2014196 - 2015629 | 51852.1 |
| 30s ribosomal protein s6 | DI534_09525 | Not Available | Positive | 2015844 - 2016275 | 15635.7 |
| single-stranded dna-binding protein | DI534_09530 | Not Available | Positive | 2016279 - 2016773 | 17413.9 |
| 30s ribosomal protein s18 | DI534_09535 | Not Available | Positive | 2016821 - 2017084 | 9436.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
