Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | DI534_09440 | Not Available | Negative | 1999014 - 2000414 | 52648.9 |
| 50s ribosomal protein l34 | DI534_09445 | Not Available | Positive | 2000700 - 2000837 | 5365.69 |
| ribonuclease p protein component | DI534_09450 | Not Available | Positive | 2000847 - 2001185 | 12236.0 |
| membrane protein insertion efficiency factor yidd | DI534_09455 | Not Available | Positive | 2001182 - 2001496 | 11737.3 |
| membrane protein insertase yidc | DI534_09460 | Not Available | Positive | 2001507 - 2002484 | 36471.2 |
| dna-binding protein | DI534_09465 | Not Available | Positive | 2002481 - 2002981 | 17782.6 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DI534_09470 | Not Available | Positive | 2003016 - 2003645 | 22687.8 |
| hypothetical protein | DI534_09475 | Not Available | Positive | 2004251 - 2004538 | 10863.0 |
| chromosome partitioning protein | DI534_09480 | Not Available | Positive | 2004690 - 2005625 | 33810.4 |
| chromosome partitioning protein parb | DI534_09485 | Not Available | Positive | 2005625 - 2006575 | 34068.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
